USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: Q9BSJ8 USC-OGP 2-DE database:  Q9BSJ8 Q9BSJ8 General information about the entry View entry in simple text format Entry name ESYT1_HUMAN Primary accession number Q9BSJ8 Secondary accession number(s) Q9Y416 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Extended synaptotagmin-1; Short=E-Syt1; AltName: Full=Membrane-bound C2 domain-containing protein;. Gene name Name=ESYT1 Synonyms=FAM62A, KIAA0747, MBC2 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_4-7 {PLATELET 4-7} Homo sapiens (Human)   map experimental info   PLATELET_4-7 MAP LOCATIONS: SPOT OGP-0439: pI=5.93; Mw=37926 Cross-references UniProtKB/Swiss-Prot Q9BSJ8; ESYT1_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name ESYT1_HUMAN Primary accession number Q9BSJ8 Secondary accession number(s) A0FGR7 A8K2S2 O94848 Q6PJN4 Q9H6J1 Q9H6W2 Q9Y416 Sequence was last modified on  June 1, 2001 (version 1) Annotations were last modified on  March 15, 2017 (version 140) Name and origin of the protein Description RecName: Full=Extended synaptotagmin-1; Short=E-Syt1; AltName: Full=Membrane-bound C2 domain-containing protein; Gene name Name=ESYT1 Synonyms=FAM62A, KIAA0747, MBC2 Encoded on Name=ESYT1; Synonyms=FAM62A, KIAA0747, MBC2 Keywords Acetylation; Alternative splicing; Calcium; Cell membrane; Coiled coil; Complete proteome; Direct protein sequencing; Endoplasmic reticulum; Lipid transport; Lipid-binding; Membrane; Metal-binding; Phosphoprotein; Polymorphism; Reference proteome; Repeat; Transmembrane; Transmembrane helix; Transport. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL DQ993200; ABJ97705.1; -; mRNA EMBL AK025463; BAB15139.1; ALT_INIT; mRNA EMBL AK025878; BAB15268.1; ALT_INIT; mRNA EMBL AK290337; BAF83026.1; -; mRNA EMBL CH471054; EAW96891.1; -; Genomic_DNA EMBL BC004998; AAH04998.1; -; mRNA EMBL AB018290; BAA34467.1; -; mRNA EMBL AL050134; CAB43284.1; -; mRNA CCDS CCDS53801.1; -. [Q9BSJ8-2]; . CCDS CCDS8904.1; -. [Q9BSJ8-1]; . PIR T08769; T08769; . PIR T13156; T13156; . RefSeq NP_001171725.1; NM_001184796.1. [Q9BSJ8-2]; . RefSeq NP_056107.1; NM_015292.2. [Q9BSJ8-1]; . UniGene Hs.632729; -; . ProteinModelPortal Q9BSJ8; -; . SMR Q9BSJ8; -; . BioGrid 116927; 36; . DIP DIP-57197N; -; . IntAct Q9BSJ8; 21; . MINT MINT-1144538; -; . STRING 9606.ENSP00000267113; -; . ChEMBL CHEMBL3621033; -; . TCDB 9.A.57.1.1; the extended-synaptotagmin (e-syt) family; . iPTMnet Q9BSJ8; -; . PhosphoSitePlus Q9BSJ8; -; . SwissPalm Q9BSJ8; -; . BioMuta ESYT1; -; . DMDM 74733019; -; . OGP Q9Y416; -; . EPD Q9BSJ8; -; . MaxQB Q9BSJ8; -; . PaxDb Q9BSJ8; -; . PeptideAtlas Q9BSJ8; -; . PRIDE Q9BSJ8; -; . DNASU 23344; -; . Ensembl ENST00000267113; ENSP00000267113; ENSG00000139641. [Q9BSJ8-2]; . Ensembl ENST00000394048; ENSP00000377612; ENSG00000139641. [Q9BSJ8-1]; . GeneID 23344; -; . KEGG hsa:23344; -; . UCSC uc001sjq.4; human. [Q9BSJ8-1]; . CTD 23344; -; . DisGeNET 23344; -; . GeneCards ESYT1; -; . HGNC HGNC:29534; ESYT1; . HPA HPA016858; -; . HPA HPA076926; -; . neXtProt NX_Q9BSJ8; -; . OpenTargets ENSG00000139641; -; . PharmGKB PA165512688; -; . eggNOG ENOG410ISCC; Eukaryota; . eggNOG ENOG410XPR4; LUCA; . GeneTree ENSGT00550000074417; -; . HOVERGEN HBG055795; -; . InParanoid Q9BSJ8; -; . OMA SQHSGVE; -; . PhylomeDB Q9BSJ8; -; . TreeFam TF324255; -; . Reactome R-HSA-1660662; Glycosphingolipid metabolism; . ChiTaRS ESYT1; human; . GeneWiki FAM62A; -; . GenomeRNAi 23344; -; . PRO PR:Q9BSJ8; -; . Proteomes UP000005640; Chromosome 12; . Bgee ENSG00000139641; -; . CleanEx HS_FAM62A; -; . ExpressionAtlas Q9BSJ8; baseline and differential; . Genevisible Q9BSJ8; HS; . GO GO:0005783; C:endoplasmic reticulum; IDA:HPA; . GO GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome; . GO GO:0030176; C:integral component of endoplasmic reticulum membrane; IDA:UniProtKB; . GO GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA; . GO GO:0016020; C:membrane; IDA:UniProtKB; . GO GO:0044232; C:organelle membrane contact site; IBA:GO_Central; . GO GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell; . GO GO:0008289; F:lipid binding; IEA:UniProtKB-KW; . GO GO:0046872; F:metal ion binding; IEA:UniProtKB-KW; . GO GO:0006687; P:glycosphingolipid metabolic process; TAS:Reactome; . GO GO:0006869; P:lipid transport; IEA:UniProtKB-KW; . Gene3D 2.60.40.150; -; 5; . InterPro IPR000008; C2_dom; . InterPro IPR031468; SMP_LBD; . Pfam PF00168; C2; 5; . Pfam PF17047; SMP_LBD; 1; . PRINTS PR00360; C2DOMAIN; . SMART SM00239; C2; 5; . SUPFAM SSF49562; SSF49562; 5; . PROSITE PS50004; C2; 5; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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